plot.inla {INLA} | R Documentation

## Default INLA plotting

### Description

Takes an `inla` object produced by `inla` and plot the results

### Usage

    ## S3 method for class 'inla'
    plot(
      x,
      plot.fixed.effects = TRUE,
      plot.lincomb = TRUE,
      plot.random.effects = TRUE,
      plot.hyperparameters = TRUE,
      plot.predictor = TRUE,
      plot.q = TRUE,
      plot.cpo = TRUE,
      plot.prior = FALSE,
      plot.opt.trace = FALSE,
      single = FALSE,
      postscript = FALSE,
      pdf = FALSE,
      prefix = "inla.plots/figure-",
      intern = FALSE,
      debug = FALSE,
      cex = 1.75,
      ...
    )

### Arguments

`x` | A fitted `inla` object produced by `inla`
`plot.fixed.effects` | Boolean indicating if posterior marginals for the fixed effects in the model should be plotted
`plot.lincomb` | Boolean indicating if posterior marginals for the linear combinations should be plotted
`plot.random.effects` | Boolean indicating if posterior mean and quantiles for the random effects in the model should be plotted
`plot.hyperparameters` | Boolean indicating if posterior marginals for the hyperparameters in the model should be plotted
`plot.predictor` | Boolean indicating if posterior mean and quantiles for the linear predictor in the model should be plotted
`plot.q` | Boolean indicating if precision matrix should be displayed
`plot.cpo` | Boolean indicating if CPO/PIT values should be plotted
`plot.prior` | Plot also the prior density for the hyperparameters
`plot.opt.trace` | Plot optimization trace
`single` | Boolean indicating if there should be more than one plot per page (FALSE) or just one (TRUE)
`postscript` | Boolean indicating if postscript files should be produced instead
`pdf` | Boolean indicating if PDF files should be produced instead
`prefix` | The prefix for the created files. Additional numbering and suffix is added.
`intern` | Plot also the hyperparameters in its internal scale.
`debug` | Write some debug information
`cex` | The `cex` parameter in `par()`. If set to `NULL` or `0`, then default values will be used for graphics parameters
`...` | Additional arguments to `postscript()`, `pdf()` or `dev.new()`.

### Value

The return value is a list of the files created (if any).

### Author(s)

Havard Rue hrue@r-inla.org

### See Also

`inla()`

### Examples

    ## Not run:
    result = inla(...)
    plot(result)
    plot(result, single = TRUE, plot.prior = TRUE)
    plot(result, single = TRUE, pdf = TRUE, paper = "a4")

    ## End(Not run)

[Package INLA version 26.08.22 Index]